6Z9I date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, G3H, MG enzyme
Primary referenceSubstrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods., Voutilainen S, Heinonen M, Andberg M, Jokinen E, Maaheimo H, Paakkonen J, Hakulinen N, Rouvinen J, Lahdesmaki H, Kaski S, Rousu J, Penttila M, Koivula A, Appl Microbiol Biotechnol. 2020 Dec;104(24):10515-10529. doi:, 10.1007/s00253-020-10960-x. Epub 2020 Nov 4. PMID:33147349
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (6z9i.pdb1.gz) 46 Kb
  • Biological Unit Coordinates (6z9i.pdb2.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 6Z9I
  • CSU: Contacts of Structural Units for 6Z9I
  • Structure Factors (288 Kb)
  • Retrieve 6Z9I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6Z9I from S2C, [Save to disk]
    • View 6Z9I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6z9i_A] [6z9i_B]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science