6ZDH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG enzyme
Primary referenceStructural basis for the neutralization of SARS-CoV-2 by an antibody from a convalescent patient., Zhou D, Duyvesteyn HME, Chen CP, Huang CG, Chen TH, Shih SR, Lin YC, Cheng CY, Cheng SH, Huang YC, Lin TY, Ma C, Huo J, Carrique L, Malinauskas T, Ruza RR, Shah PNM, Tan TK, Rijal P, Donat RF, Godwin K, Buttigieg KR, Tree JA, Radecke J, Paterson NG, Supasa P, Mongkolsapaya J, Screaton GR, Carroll MW, Gilbert-Jaramillo J, Knight ML, James W, Owens RJ, Naismith JH, Townsend AR, Fry EE, Zhao Y, Ren J, Stuart DI, Huang KA, Nat Struct Mol Biol. 2020 Jul 31. pii: 10.1038/s41594-020-0480-y. doi:, 10.1038/s41594-020-0480-y. PMID:32737466
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1166 Kb) [Save to disk]
  • Biological Unit Coordinates (6zdh.pdb1.gz) 1150 Kb
  • LPC: Ligand-Protein Contacts for 6ZDH
  • CSU: Contacts of Structural Units for 6ZDH
  • Retrieve 6ZDH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ZDH from S2C, [Save to disk]
  • View 6ZDH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6zdh_A] [6zdh_B] [6zdh_L] [6zdh_F] [6zdh_D] [6zdh_G] [6zdh_C] [6zdh_H] [6zdh_I]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science