7A62 Oxidoreductase date Aug 24, 2020
title Structure Of Human Indoleamine-2,3-Dioxygenase 1 (Hido1) Wit Complete Jk Loop
authors M.Mirgaux, J.Wouters
compound source
Molecule: Indoleamine 2,3-Dioxygenase 1
Chain: A, B, C, D
Synonym: Ido-1,Indoleamine-Pyrrole 2,3-Dioxygenase
Ec: 1.13.11.52
Engineered: Yes
Mutation: Yes
Other_details: Gol And Hem Are Ligands.
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ido1, Ido, Indo
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28a
symmetry Space Group: P 21 21 2
R_factor 0.212 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.960 117.950 216.410 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.44 Å
ligand CL, GOL, HEM enzyme Oxidoreductase E.C.1.13.11.52 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (268 Kb) [Save to disk]
  • Biological Unit Coordinates (7a62.pdb1.gz) 64 Kb
  • Biological Unit Coordinates (7a62.pdb2.gz) 66 Kb
  • Biological Unit Coordinates (7a62.pdb3.gz) 69 Kb
  • Biological Unit Coordinates (7a62.pdb4.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 7A62
  • CSU: Contacts of Structural Units for 7A62
  • Structure Factors (1371 Kb)
  • Retrieve 7A62 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7A62 from S2C, [Save to disk]
    • View 7A62 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7A62
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7a62_C] [7a62_D] [7a62_A] [7a62_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7A62
  • Community annotation for 7A62 at PDBWiki (http://pdbwiki.org)

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