7BKA Lyase date Jan 15, 2021
title Crystal Structure Of 3-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase (Faba) From Pseudomonas Aeruginosa In Complex W Ddd01870824
authors L.Moynie, J.H.Naismith
compound source
Molecule: 3-Hydroxydecanoyl-[Acyl-Carrier-Protein] Dehydrat
Chain: A, B, C, D, E
Synonym: 3-Hydroxyacyl-[Acyl-Carrier-Protein] Dehydratase F Hydroxydecanoyl Thioester Dehydrase,Trans-2-Decenoyl-[Acyl- Protein] Isomerase;
Ec: 4.2.1.59,5.3.3.14
Engineered: Yes
 Organism_scientific: Pseudomonas Aeruginosa (Strain Atcc 15 22644 Cip 104116 Jcm 14847 Lmg 12228 1c Prs 101
Organism_taxid: 208964
Strain: Atcc 15692 Dsm 22644 Cip 104116 Jcm 14847 L 1c Prs 101 Pao1;
Gene: Faba, Pa1610
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.196 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.670 142.030 77.900 90.00 114.14 90.00
method X-Ray Diffractionresolution 1.88 Å
ligand 4JC, DMS enzyme Lyase E.C.4.2.1.59 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk]
  • Biological Unit Coordinates (7bka.pdb1.gz) 55 Kb
  • Biological Unit Coordinates (7bka.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (7bka.pdb3.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 7BKA
  • CSU: Contacts of Structural Units for 7BKA
  • Structure Factors (3719 Kb)
  • Retrieve 7BKA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7BKA from S2C, [Save to disk]
    • View 7BKA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7BKA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7bka_A] [7bka_C] [7bka_E] [7bka_D] [7bka_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7BKA
  • Community annotation for 7BKA at PDBWiki (http://pdbwiki.org)

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