7CLZ Hydrolase date Jul 22, 2020
title Crystal Structure Of Alp1u W187fy247f In Complex With Fluos
authors L.Zhang, B.C.De
compound source
Molecule: Putative Hydrolase
Chain: A, B, C, D
Synonym: Alp1u
Engineered: Yes
Mutation: Yes
Organism_scientific: Streptomyces Ambofaciens (Strain Atcc 3486 Dsm 40053 Jcm 4204 Nbrc 12836 Nrrl B-2516);
Organism_taxid: 278992
Gene: Samt0137, Samt0138
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.193 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.664 100.208 117.450 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand BO3, DY9, MLT, NA enzyme
Primary referenceMutation of an atypical oxirane oxyanion hole improves regioselectivity of the alpha/beta-fold epoxide hydrolase Alp1U., Zhang L, De BC, Zhang W, Mandi A, Fang Z, Yang C, Zhu Y, Kurtan T, Zhang C, J Biol Chem. 2020 Oct 1. pii: RA120.015563. doi: 10.1074/jbc.RA120.015563. PMID:33004437
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (402 Kb) [Save to disk]
  • Biological Unit Coordinates (7clz.pdb1.gz) 194 Kb
  • Biological Unit Coordinates (7clz.pdb2.gz) 194 Kb
  • LPC: Ligand-Protein Contacts for 7CLZ
  • CSU: Contacts of Structural Units for 7CLZ
  • Structure Factors (1846 Kb)
  • Retrieve 7CLZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7CLZ from S2C, [Save to disk]
  • View 7CLZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7CLZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7clz_A] [7clz_B] [7clz_D] [7clz_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7CLZ
  • Community annotation for 7CLZ at PDBWiki (http://pdbwiki.org)

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