7CN2 Immune System Viral Protein date Jul 29, 2020
title Subparticle Refinement Of Human Papillomavirus Type 16 Pesud Complex With H16.001 Fab
authors M.Z.He, S.W.Li
compound source
Molecule: The Light Chain Variable Region Of H16.001 Fab Fr
Chain: g, I, j, k, m, L
 Organism_scientific: Oryctolagus Cuniculus
Organism_taxid: 9986

Molecule: The Heavy Chain Variable Region Of H16.001 Fab Fr
Chain: G, I, J, K, M, H
Organism_scientific: Oryctolagus Cuniculus
Organism_taxid: 9986

Molecule: Major Capsid Protein L1
Chain: A, B, C, D, E, F
Engineered: Yes
Organism_scientific: Human Papillomavirus Type 16
Organism_taxid: 333760
Gene: L1
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.43 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (603 Kb) [Save to disk]
  • Biological Unit Coordinates (7cn2.pdb1.gz) 590 Kb
  • CSU: Contacts of Structural Units for 7CN2
  • Retrieve 7CN2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7CN2 from S2C, [Save to disk]
    • View 7CN2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7CN2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7cn2_M] [7cn2_J] [7cn2_B] [7cn2_E] [7cn2_I] [7cn2_i] [7cn2_K] [7cn2_C] [7cn2_G] [7cn2_D] [7cn2_m] [7cn2_A] [7cn2_g] [7cn2_L] [7cn2_j] [7cn2_H] [7cn2_F] [7cn2_k]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7CN2
  • Community annotation for 7CN2 at PDBWiki (http://pdbwiki.org)

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