7DFL Membrane Protein date Nov 09, 2020
title Cryo-Em Structure Of Histamine H1 Receptor Gq Complex
authors Y.He, R.Xia, N.Wang, Z.Xu
compound source
Molecule: Histamine H1 Receptor
Chain: R
Synonym: H1r,Hh1r
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hrh1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Guanine Nucleotide-Binding Protein G(I)G(S)G(T) Beta-1;
Chain: B
Synonym: Transducin Beta Chain 1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gnb1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Guanine Nucleotide-Binding Protein G(I)G(S)G(O) Gamma-2;
Chain: G
Synonym: G Gamma-I
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gng2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Guanine Nucleotide-Binding Protein G(Q) Subunit A
Chain: A
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Scfv16
Chain: C
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.30 Å
ligand HSM enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (170 Kb) [Save to disk]
  • Biological Unit Coordinates (7dfl.pdb1.gz) 162 Kb
  • LPC: Ligand-Protein Contacts for 7DFL
  • CSU: Contacts of Structural Units for 7DFL
  • Retrieve 7DFL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7DFL from S2C, [Save to disk]
  • View 7DFL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7DFL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7dfl_C] [7dfl_A] [7dfl_B] [7dfl_G] [7dfl_R]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7DFL
  • Community annotation for 7DFL at PDBWiki (http://pdbwiki.org)

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