7DUQ Biosynthetic Protein date Jan 11, 2021
title Cryo-Em Structure Of The Compound 2 And Glp-1-Bound Human Gl Receptor-Gs Complex
authors Z.Cong, L.Chen, H.Ma, Q.Zhou, X.Zou, C.Ye, A.Dai, Q.Liu, W.Huang, X.S X.Wang, P.Xu, L.Zhao, T.Xia, W.Zhong, D.Yang, H.E.Xu, Y.Zhang, M.Wa
compound source
Molecule: Glucagon-Like Peptide 1
Chain: P
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Glucagon-Like Peptide 1 Receptor
Chain: R
Synonym: Glp-1r
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Glp1r
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Guanine Nucleotide-Binding Protein G(S) Subunit A Isoforms Short;
Chain: A
Synonym: Adenylate Cyclase-Stimulating G Alpha Protein
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gnas, Gnas1, Gsp
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Guanine Nucleotide-Binding Protein G(I)G(S)G(T) Beta-1;
Chain: B
Synonym: Transducin Beta Chain 1
Engineered: Yes

Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Gene: Gnb1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Guanine Nucleotide-Binding Protein G(I)G(S)G(O) Gamma-2;
Chain: G
Synonym: G Gamma-I
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Gene: Gng2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Nanobody-35
Chain: N
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 2.50 Å
ligand CLR, HNO enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk]
  • Biological Unit Coordinates (7duq.pdb1.gz) 171 Kb
  • LPC: Ligand-Protein Contacts for 7DUQ
  • CSU: Contacts of Structural Units for 7DUQ
  • Retrieve 7DUQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7DUQ from S2C, [Save to disk]
  • View 7DUQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7DUQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7duq_N] [7duq_G] [7duq_P] [7duq_B] [7duq_A] [7duq_R]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7DUQ
  • Community annotation for 7DUQ at PDBWiki (http://pdbwiki.org)

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