7ENF Viral Protein date Apr 16, 2021
title Cryo-Em Structure Of The Sars-Cov-2 S-6p In Complex With Fab
authors X.F.Wang, Y.Q.Zhu
compound source
Molecule: Spike Glycoprotein
Chain: A, B, C
Fragment: Unp Residues 1-1208
Synonym: S Glycoprotein,E2,Peplomer Protein
Engineered: Yes
Mutation: Yes
 Organism_scientific: Severe Acute Respiratory Syndrome Coro 2;
Organism_common: 2019-Ncov, Sars-Cov-2
Organism_taxid: 2697049
Gene: S, 2
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293

Molecule: Light Chain Of Fab30
Chain: O
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293

Molecule: Heavy Chain Of Fab30
Chain: P
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 2.76 Å
ligand NAG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (490 Kb) [Save to disk]
  • Biological Unit Coordinates (7enf.pdb1.gz) 476 Kb
  • LPC: Ligand-Protein Contacts for 7ENF
  • CSU: Contacts of Structural Units for 7ENF
  • Retrieve 7ENF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7ENF from S2C, [Save to disk]
    • View 7ENF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7ENF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7enf_O] [7enf_B] [7enf_C] [7enf_A] [7enf_P]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7ENF
  • Community annotation for 7ENF at PDBWiki (http://pdbwiki.org)

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