7JSX Plant Protein, Lyase date Aug 16, 2020
title Epyc1(106-135) Peptide-Bound Rubisco
authors D.Matthies, S.He, M.C.Jonikas
compound source
Molecule: Ribulose Bisphosphate Carboxylase Large Chain
Chain: A, C, E, G, I, K, M, O
Synonym: Rubisco Large Subunit
Ec: 4.1.1.39
 Organism_scientific: Chlamydomonas Reinhardtii
Organism_taxid: 3055

Molecule: Ribulose Bisphosphate Carboxylase Small Chain 2, Chloroplastic;
Chain: B, D, F, H, J, L, N, P
Synonym: Rubisco Small Subunit 2
Ec: 4.1.1.39
Organism_scientific: Chlamydomonas Reinhardtii
Organism_taxid: 3055

Molecule: Epyc1
Chain: q, r, s, t, u, v, w, x
Organism_scientific: Chlamydomonas Reinhardtii
Organism_taxid: 3055
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 2.06 Å
ligand SMC enzyme Lyase E.C.4.1.1.39 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (671 Kb) [Save to disk]
  • Biological Unit Coordinates (7jsx.pdb1.gz) 647 Kb
  • LPC: Ligand-Protein Contacts for 7JSX
  • CSU: Contacts of Structural Units for 7JSX
  • Retrieve 7JSX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7JSX from S2C, [Save to disk]
    • View 7JSX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7JSX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7jsx_r] [7jsx_F] [7jsx_P] [7jsx_u] [7jsx_O] [7jsx_D] [7jsx_I] [7jsx_H] [7jsx_N] [7jsx_M] [7jsx_B] [7jsx_J] [7jsx_x] [7jsx_G] [7jsx_t] [7jsx_A] [7jsx_v] [7jsx_L] [7jsx_s] [7jsx_q] [7jsx_K] [7jsx_w] [7jsx_E] [7jsx_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7JSX
  • Community annotation for 7JSX at PDBWiki (http://pdbwiki.org)

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