7LIN Protein Binding date Jan 27, 2021
title X-Ray Structure Of Spop Math Domain (D140g) In Complex With Peptide
authors M.V.Botuyan, G.Cui, G.Mer
compound source
Molecule: Speckle-Type Poz Protein
Chain: A
Fragment: Math Domain
Synonym: Hib Homolog 1,Roadkill Homolog 1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Spop
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Tp53-Binding Protein 1 Peptide
Chain: B
Synonym: P53bp1
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 2 2 21
R_factor 0.167 R_Free 0.186
length a length b length c angle alpha angle beta angle gamma
43.657 90.724 92.819 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.44 Å
ligand SO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (7lin.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 7LIN
  • CSU: Contacts of Structural Units for 7LIN
  • Structure Factors (599 Kb)
  • Retrieve 7LIN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7LIN from S2C, [Save to disk]
  • View 7LIN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7LIN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 7lin from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7lin_B] [7lin_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7LIN
  • Community annotation for 7LIN at PDBWiki (http://pdbwiki.org)

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