7OH7 Membrane Protein date May 09, 2021
title Cryo-Em Structure Of Drs2p-Cdc50p In The E1-Amppcp State Wit Bound
authors M.Timcenko, T.Dieudonne, C.Montigny, T.Boesen, J.A.Lyons, G.Lenoi P.Nissen
compound source
Molecule: Probable Phospholipid-Transporting Atpase Drs2,Pr Phospholipid-Transporting Atpase Drs2;
Chain: A
Ec: 7.6.2.1,7.6.2.1
Engineered: Yes
Other_details: Drs2p With A Thrombin Cleavable C-Terminal B Acceptor Domain (Bad) Tag, And Additional Thrombin Cleavage The C-Terminus.,Drs2p With A Thrombin Cleavable C-Terminal Acceptor Domain (Bad) Tag, And Additional Thrombin Cleavage The C-Terminus.;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: Drs2, Yal026c, Fun38
Expression_system: Saccharomyces Cerevisiae
Expression_system_taxid: 4932
Expression_system_strain: W303-1a Dpep4
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pyedp60

Molecule: Cell Division Control Protein 50
Chain: C
Engineered: Yes
Other_details: Cdc50p With Thrombin Cleavable C-Terminal Hi

Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: Cdc50, Ycr094w, Ycr94w
Expression_system: Saccharomyces Cerevisiae
Expression_system_taxid: 4932
Expression_system_strain: W303-1a Dpep4
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pyedp60
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.80 Å
ligand 2Y5, ACP, BMA, MG, NAG enzyme E.C.7.6.2.1 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (219 Kb) [Save to disk]
  • Biological Unit Coordinates (7oh7.pdb1.gz) 208 Kb
  • LPC: Ligand-Protein Contacts for 7OH7
  • CSU: Contacts of Structural Units for 7OH7
  • Retrieve 7OH7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7OH7 from S2C, [Save to disk]
  • View 7OH7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7OH7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7oh7_A] [7oh7_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7OH7
  • Community annotation for 7OH7 at PDBWiki (http://pdbwiki.org)

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