7RBS Hydrolase date Jul 06, 2021
title The Crystal Structure Of Papain-Like Protease Of Sars Cov-2, Mutant, In Complex With Human Isg15
authors J.Osipiuk, C.Tesar, R.Jedrzejczak, M.Endres, P.Wydorski, L.Joachi A.Joachimiak, Center For Structural Genomics Of Infectious D (Csgid)
compound source
Molecule: Papain-Like Protease
Chain: A, C, E, G, I
Synonym: Non-Structural Protein 3, Nsp3, Pl2-Pro, Papain-Li Proteinase, Pl-Pro;
Ec: 3.4.19.12
Engineered: Yes
Mutation: Yes
Other_details: Three N-Terminal Residues (Sna) Are Expressi
Organism_scientific: Severe Acute Respiratory Syndrome Coro 2;
Organism_common: 2019-Ncov
Organism_taxid: 2697049
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg53

Molecule: Ubiquitin-Like Protein Isg15
Chain: B, D, F, H, J
Synonym: Interferon-Induced 15 Kda Protein,Interferon-Induc Protein,Ip17,Ubiquitin Cross-Reactive Protein,Hucrp;
Engineered: Yes
Other_details: Three N-Terminal Residues (Sna) Are Expressi

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Isg15, G1p2, Ucrp
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg53
symmetry Space Group: C 2 2 21
R_factor 0.195 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
153.673 220.870 232.787 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.98 Å
ligand ZN enzyme Hydrolase E.C.3.4.19.12 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (760 Kb) [Save to disk]
  • Biological Unit Coordinates (7rbs.pdb1.gz) 154 Kb
  • Biological Unit Coordinates (7rbs.pdb2.gz) 156 Kb
  • Biological Unit Coordinates (7rbs.pdb3.gz) 155 Kb
  • Biological Unit Coordinates (7rbs.pdb4.gz) 156 Kb
  • Biological Unit Coordinates (7rbs.pdb5.gz) 156 Kb
  • LPC: Ligand-Protein Contacts for 7RBS
  • CSU: Contacts of Structural Units for 7RBS
  • Structure Factors (1874 Kb)
  • Retrieve 7RBS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7RBS from S2C, [Save to disk]
  • View 7RBS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7RBS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7rbs_D] [7rbs_B] [7rbs_H] [7rbs_G] [7rbs_E] [7rbs_J] [7rbs_F] [7rbs_A] [7rbs_I] [7rbs_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7RBS
  • Community annotation for 7RBS at PDBWiki (http://pdbwiki.org)

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