7RRK Fluorescent Protein date Aug 09, 2021
title Crystal Structure Of Fast Switching M159e Mutant Of Fluoresc Protein Dronpa (Dronpa2)
authors C.Y.Lin, M.G.Romei, I.I.Mathews, S.G.Boxer
compound source
Molecule: Fluorescent Protein Dronpa
Chain: A, B, C, D, E, F, G, H
Engineered: Yes
Mutation: Yes
 Organism_scientific: Echinophyllia Sp. Sc22
Organism_taxid: 301887
Gene: Dronpa
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: P 1 21 1
R_factor 0.242 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.825 85.732 143.050 90.00 95.05 90.00
method X-Ray Diffractionresolution 1.93 Å
ligand GYC enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (609 Kb) [Save to disk]
  • Biological Unit Coordinates (7rrk.pdb1.gz) 294 Kb
  • Biological Unit Coordinates (7rrk.pdb2.gz) 304 Kb
  • LPC: Ligand-Protein Contacts for 7RRK
  • CSU: Contacts of Structural Units for 7RRK
  • Structure Factors (1348 Kb)
  • Retrieve 7RRK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7RRK from S2C, [Save to disk]
    • View 7RRK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7RRK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7rrk_F] [7rrk_A] [7rrk_B] [7rrk_G] [7rrk_E] [7rrk_C] [7rrk_D] [7rrk_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7RRK
  • Community annotation for 7RRK at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science