7SYA
Viral Protein
date
Nov 24, 2021
title
Kinetically Trapped Pseudomonas-Phage Pap3 Portal Protein - Length
authors
C.F.D.Hou, N.A.Swanson, F.Li, R.Yang, R.K.Lokareddy, G.Cingolani
compound
source
Molecule
: Portal Protein
Chain
: a, b, c, d, e, f, g, h, I, j, k, l
Engineered
: Yes
Organism_scientific
: Pseudomonas Virus Pap3
Organism_taxid
: 188350
Gene
: Orf4
Expression_system
: Escherichia Coli
Expression_system_taxid
: 562
symmetry
Space Group
: P 1
R_factor
R_Free
crystal
cell
length a
length b
length c
angle alpha
angle beta
angle gamma
1.000
1.000
1.000
90.00
90.00
90.00
method
Electron Microscopy
resolution
3.50 Å
Data retrieval
Asymmetric unit, PDB entry:
[header only]
[complete with coordinates]
(898 Kb)
[Save to disk]
Biological Unit Coordinates
(7sya.pdb1.gz) 887 Kb
CSU:
Contacts of Structural Units
for 7SYA
Retrieve 7SYA in
mmCIF
format
[Save to disk]
SEQRES to COORDINATES
correlation for
7SYA
from
S2C
,
[Save to disk]
View 7SYA in 3D
Proteopedia
, because life has more than 2D.
On
Jmol
, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
On
FirstGlance
, an excellent tool for a guided tour on the structure components, by
E. Martz
.
Visual 3D analysis of 7SYA
Ramachandran
plot from
PDBSum
Structure-derived information
Dipole
moment, from
Dipole Server
at Weizmann Institute
Sequence-derived information
View one-letter amino acid or nucleotide sequence for each chain:
[7sya_b]
[7sya_i]
[7sya_e]
[7sya_f]
[7sya_a]
[7sya_c]
[7sya_d]
[7sya_k]
[7sya_j]
[7sya_g]
[7sya_l]
[7sya_h]
SWISS-PROT
database:
Domain
organization of by
SWISSPFAM
Other resources with information on 7SYA
Community annotation for
7SYA
at
PDBWiki
(http://pdbwiki.org)
You may enter another PDB ID code
Go [
Back
], to the [
PDB Lite
page], to the [
OCA Search
page] or to the [
PDB Home
page]
OCA© by
Jaime Prilusky
, 1996-2014,2022
Bioinformatics Unit
Weizmann Institute of Science