7VOC Dehydratase date Oct 13, 2021
title The Crystal Structure Of A Radical Sam Enzyme Blse Involved Biosynthesis Of Blasticidin S
authors X.L.Hou, J.H.Zhou
compound source
Molecule: Cytosylglucuronate Decarboxylase
Chain: C
Engineered: Yes
 Organism_scientific: Streptomyces Griseochromogenes
Organism_taxid: 68214
Gene: Avl59_19980
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 41 2 2
R_factor 0.214 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
163.920 163.920 158.810 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.62 Å
ligand 7QO, GOL, SAM, SF4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (7voc.pdb1.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 7VOC
  • CSU: Contacts of Structural Units for 7VOC
  • Structure Factors (1409 Kb)
  • Retrieve 7VOC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7VOC from S2C, [Save to disk]
    • View 7VOC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7VOC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7voc_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7VOC
  • Community annotation for 7VOC at PDBWiki (http://pdbwiki.org)

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