7X0D Hydrolase date Feb 21, 2022
title Crystal Structure Of Phospholipase A1, Capla1
authors Y.Heo, I.Lee, S.Moon, W.Lee
compound source
Molecule: Phospholipase A1
Chain: A, B, C, D
Ec: 3.1.1.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Capsicum Annuum
Organism_taxid: 4072
Gene: Pla1, T459_03599
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.206 R_Free 0.260
crystal
cell
length a length b length c angle alpha angle beta angle gamma
102.313 59.568 147.319 90.00 90.14 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand SO4 enzyme Hydrolase E.C.3.1.1 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (259 Kb) [Save to disk]
  • Biological Unit Coordinates (7x0d.pdb1.gz) 129 Kb
  • Biological Unit Coordinates (7x0d.pdb2.gz) 128 Kb
  • LPC: Ligand-Protein Contacts for 7X0D
  • CSU: Contacts of Structural Units for 7X0D
  • Structure Factors (1510 Kb)
  • Retrieve 7X0D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7X0D from S2C, [Save to disk]
  • View 7X0D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7X0D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7x0d_A] [7x0d_D] [7x0d_B] [7x0d_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7X0D
  • Community annotation for 7X0D at PDBWiki (http://pdbwiki.org)

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