113D THE STRUCTURE OF GUANOSINE-THYMIDINE MISMATCHES IN B-DNA AT 2.5 ANGSTROMS RESOLUTION date
authors Hunter, W.N., Brown, T., Kneale, G., Anand, N.N., Rabinovich, D., Kennard, O.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
Primary referenceThe structure of guanosine-thymidine mismatches in B-DNA at 2.5-A resolution., Hunter WN, Brown T, Kneale G, Anand NN, Rabinovich D, Kennard O, J Biol Chem 1987 Jul 25;262(21):9962-70. PMID:3611072
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (13 Kb) [Save to disk]
  • Biological Unit Coordinates (113d.pdb1.gz) 10 Kb
  • CSU: Contacts of Structural Units for 113D
  • Likely Quarternary Molecular Structure file(s) for 113D
  • Retrieve 113D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 113D from S2C, [Save to disk]
  • View 113D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 113D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 113D, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [113d_A] [113d_B] [113d]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 113D
  • Community annotation for 113D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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