150D GUANINE.1,N6-ETHENOADENINE BASE-PAIRS IN THE CRYSTAL STRUCTURE OF D(CGCGAATT(EDA)GCG) date
authors Leonard, G.A., McAuley-Hecht, K.E., Gibson, N.J., Brown, T., Watson, W.P., Hunter, W.N.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.25
ligand EDA, MG enzyme
Primary referenceGuanine-1,N6-ethenoadenine base pairs in the crystal structure of d(CGCGAATT(epsilon dA)GCG)., Leonard GA, McAuley-Hecht KE, Gibson NJ, Brown T, Watson WP, Hunter WN, Biochemistry 1994 Apr 26;33(16):4755-61. PMID:8161534
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (17 Kb) [Save to disk]
  • Biological Unit Coordinates (150d.pdb1.gz) 13 Kb
  • LPC: Ligand-Protein Contacts for 150D
  • CSU: Contacts of Structural Units for 150D
  • Likely Quarternary Molecular Structure file(s) for 150D
  • Structure Factors (21 Kb)
  • Retrieve 150D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 150D from S2C, [Save to disk]
  • Re-refined 150d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 150D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 150D
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 150D, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [150d_B] [150d_A] [150d]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 150D
  • Community annotation for 150D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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