193L	Hydrolase (O-Glycosyl)	date	Sep 01, 1995
title	The 1.33 A Structure Of Tetragonal Hen Egg White Lysozyme
authors	M.C.Vaney, S.Maignan, M.Ries-Kautt, A.Ducruix
compound		source
Molecule: Lysozyme Chain: A		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Cellular_location: Egg White
symmetry	Space Group: P 43 21 2	R_factor 0.184 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 78.540 78.540 37.770 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.33 Å
ligand	CL, NA	enzyme
related structures	by homologous chain: 1WTM, 2IHL
Gene Ontology	Chain Function Process Component A
Primary reference	High-resolution structure (1.33 A) of a HEW lysozyme tetragonal crystal grown in the APCF apparatus. Data and structural comparison with a crystal grown under microgravity from SpaceHab-01 mission., Vaney MC, Maignan S, Ries-Kautt M, Ducriux A, Acta Crystallogr D Biol Crystallogr. 1996 May 1;52(Pt 3):505-17. PMID:15299672

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk] Biological Unit Coordinates (193l.pdb1.gz) 24 Kb LPC: Ligand-Protein Contacts for 193L CSU: Contacts of Structural Units for 193L Likely Quarternary Molecular Structure file(s) for 193L Structure Factors (164 Kb) Retrieve 193L in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 193L from S2C, [Save to disk] Re-refined 193l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 193L in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 193L

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 193L from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 193L, from MSDmotif at EBI Genome occurence of 193L's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d193l__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [193l_A] [193l] SWISS-PROT database: [P00698] Domain organization of [LYSC_CHICK] by SWISSPFAM Domain found in 193L: [LYZ1 ] by SMART

Other resources with information on 193L

Community annotation for 193L at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 193L from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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