1A5E Anti-Oncogene date Feb 13, 1998
title Solution Nmr Structure Of Tumor Suppressor P16ink4a, 18 Structures
authors I.J.L.Byeon, J.Li, K.Ericson, T.L.Selby, A.Tevelev, H.J.Kim, P.O'Maille, M.D.Tsai
compound source
Molecule: Tumor Suppressor P16ink4a
Chain: A
Engineered: Yes
Other_details: Tumor Suppressor P16ink4a
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
methodSolution NMR

Primary referenceTumor suppressor p16INK4A: determination of solution structure and analyses of its interaction with cyclin-dependent kinase 4., Byeon IJ, Li J, Ericson K, Selby TL, Tevelev A, Kim HJ, O'Maille P, Tsai MD, Mol Cell 1998 Feb;1(3):421-31. PMID:9660926
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (704 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1A5E
  • Original NMR restraints for 1A5E from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1A5E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A5E from S2C, [Save to disk]
  • View 1A5E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1A5E
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1A5E, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a5e__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1a5e from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a5e_A] [1a5e]
  • SWISS-PROT database: [P42771]
  • Domain organization of [CD2A1_HUMAN] by SWISSPFAM
  • Domain found in 1A5E: [ANK ] by SMART
  • Other resources with information on 1A5E
  • Community annotation for 1A5E at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1A5E from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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