1AD5 Tyrosine-Protein Kinase date Feb 20, 1997
title Src Family Kinase Hck-Amp-Pnp Complex
authors F.Sicheri, I.Moarefi, J.Kuriyan
compound source
Molecule: Haematopoetic Cell Kinase Hck
Chain: A, B
Fragment: Sh3-Sh2-Kinase-Regulatory Tail
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Sf9
Gene: Human Hck
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_gene: Human Hck
symmetry Space Group: P 21 21 21
R_factor 0.239 R_Free 0.307
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.767 92.360 178.290 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand ANP, CA, PTR enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1BU1, 2HCK
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of the Src family tyrosine kinase Hck., Sicheri F, Moarefi I, Kuriyan J, Nature 1997 Feb 13;385(6617):602-9. PMID:9024658
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (177 Kb) [Save to disk]
  • Biological Unit Coordinates (1ad5.pdb1.gz) 87 Kb
  • Biological Unit Coordinates (1ad5.pdb2.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 1AD5
  • CSU: Contacts of Structural Units for 1AD5
  • Likely Quarternary Molecular Structure file(s) for 1AD5
  • Retrieve 1AD5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AD5 from S2C, [Save to disk]
  • View 1AD5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AD5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AD5, from MSDmotif at EBI
  • Genome occurence of 1AD5's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ad5a2, region A:146-248 [Jmol] [rasmolscript] [script source]
        - Domain d1ad5a3, region A:249-531 [Jmol] [rasmolscript] [script source]
        - Domain d1ad5a1, region A:82-145 [Jmol] [rasmolscript] [script source]
        - Domain d1ad5b2, region B:146-248 [Jmol] [rasmolscript] [script source]
        - Domain d1ad5b3, region B:249-531 [Jmol] [rasmolscript] [script source]
        - Domain d1ad5b1, region B:82-145 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ad5_A] [1ad5] [1ad5_B]
  • SWISS-PROT database: [P08631]
  • Domain organization of [HCK_HUMAN] by SWISSPFAM
  • Domains found in 1AD5: [SH2] [SH3] [TyrKc ] by SMART
  • Other resources with information on 1AD5
  • Community annotation for 1AD5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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