1ADW Electron Transport date Feb 18, 1997
title Pseudoazurin
authors P.A.Williams
compound source
Molecule: Pseudoazurin
Chain: A, B
 Organism_scientific: Paracoccus Pantotrophus
Organism_taxid: 82367
Strain: Gb17
Atcc: 35512
Cellular_location: Periplasm
symmetry Space Group: C 1 2 1
R_factor 0.189 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.000 58.400 69.200 90.00 127.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand CU enzyme
related structures by homologous chain: 7PAZ
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • electron transfer activity


    • Primary referencePseudospecific docking surfaces on electron transfer proteins as illustrated by pseudoazurin, cytochrome c550 and cytochrome cd1 nitrite reductase., Williams PA, Fulop V, Leung YC, Chan C, Moir JW, Howlett G, Ferguson SJ, Radford SE, Hajdu J, Nat Struct Biol. 1995 Nov;2(11):975-82. PMID:7583671
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (1adw.pdb1.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 1ADW
  • CSU: Contacts of Structural Units for 1ADW
  • Likely Quarternary Molecular Structure file(s) for 1ADW
  • Structure Factors (145 Kb)
  • Retrieve 1ADW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ADW from S2C, [Save to disk]
  • Re-refined 1adw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1ADW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ADW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ADW, from MSDmotif at EBI
  • Genome occurence of 1ADW's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1adwa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1adwb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1adw_B] [1adw] [1adw_A]
  • SWISS-PROT database: [P80401]
  • Domain organization of [AZUP_PARPN] by SWISSPFAM
    • Other resources with information on 1ADW
  • Community annotation for 1ADW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1ADW from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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