1AG2	Prion Protein	date	Mar 31, 1997
title	Prion Protein Domain Prp(121-231) From Mouse, Nmr, 2 Minimiz Structure
authors	M.Billeter, R.Riek, G.Wider, K.Wuthrich, S.Hornemann, R.Glockshub
compound		source
Molecule: Major Prion Protein Chain: A Fragment: Domain 121 - 231 Synonym: Prp(121-231) Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Cell_line: Bl21 (De3) Gene: T7 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_cell_line: Bl21 (De3) Expression_system_vector_type: T7 Expression_system_plasmid: T7 Pprp-C6 Expression_system_gene: T7
method	Solution NMR
related structures	by homologous chain: 1B10
Gene Ontology	Chain Function Process Component A
Primary reference	NMR structure of the mouse prion protein domain PrP(121-321)., Riek R, Hornemann S, Wider G, Billeter M, Glockshuber R, Wuthrich K, Nature. 1996 Jul 11;382(6587):180-2. PMID:8700211

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk] Biological Unit Coordinates (1ag2.pdb1.gz) 28 Kb CSU: Contacts of Structural Units for 1AG2 Experimental data, such as chemical shifts, at BioMagResBank (BMRB) NMR Restraints Grid from BioMagResBank (BMRB) Retrieve 1AG2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1AG2 from S2C, [Save to disk]

View 1AG2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1AG2

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1AG2, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ag2__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ag2_A] [1ag2] SWISS-PROT database: [P04925] Domain organization of [PRIO_MOUSE] by SWISSPFAM Domain found in 1AG2: [PRP ] by SMART

Other resources with information on 1AG2

Community annotation for 1AG2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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