1AIE P53 Tetramerization date Apr 17, 1997
title P53 Tetramerization Domain Crystal Structure
authors P.R.E.Mittl, P.Chene, M.G.Gruetter
compound source
Molecule: P53
Chain: A
Fragment: Tetramerization Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Pgex-2t
symmetry Space Group: P 4 2 2
R_factor 0.191 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.500 45.500 33.200 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
related structures by homologous chain: 1C26
Primary referenceCrystallization and structure solution of p53 (residues 326-356) by molecular replacement using an NMR model as template., Mittl PR, Chene P, Grutter MG, Acta Crystallogr D Biol Crystallogr 1998 Jan 1;54 ( Pt 1):86-9. PMID:9761820
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk]
  • Biological Unit Coordinates (1aie.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 1AIE
  • Likely Quarternary Molecular Structure file(s) for 1AIE
  • Structure Factors (44 Kb)
  • Retrieve 1AIE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AIE from S2C, [Save to disk]
  • Re-refined 1aie structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1AIE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AIE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1AIE from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1AIE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1aie__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1aie from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1aie] [1aie_A]
  • SWISS-PROT database: [P04637]
  • Belongs to the pore-forming pnc-27 peptide of 32 aas from the p53 tumor suppressor protein (pnc-27) family according to TCDB.
  • Domain organization of [P53_HUMAN] by SWISSPFAM
  • Alignments of the sequence of 1AIE with the sequences similar proteins can be viewed for 1AIE's classification [P53_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [P53_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1AIE
  • Community annotation for 1AIE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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