1AUM HIV CAPSID C-TERMINAL DOMAIN (CAC146) date
authors Hill, C.P., Gamble, T.R., Yoo, S., Vajdos, F.F., Schwedler, U.K.Von., Worthylake, D.K., Wang, H., Mccutcheon, J.P., Sundquist, W.I.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the carboxyl-terminal dimerization domain of the HIV-1 capsid protein., Gamble TR, Yoo S, Vajdos FF, von Schwedler UK, Worthylake DK, Wang H, McCutcheon JP, Sundquist WI, Hill CP, Science 1997 Oct 31;278(5339):849-53. PMID:9346481
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (18 Kb) [Save to disk]
  • Biological Unit Coordinates (1aum.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1AUM
  • Likely Quarternary Molecular Structure file(s) for 1AUM
  • Structure Factors (19 Kb)
  • Retrieve 1AUM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AUM from S2C, [Save to disk]
  • Re-refined 1aum structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1AUM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AUM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AUM, from MSDmotif at EBI
  • Genome occurence of 1AUM's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1aum__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1aum_A] [1aum]
  • SWISS-PROT database: [P12497]
  • Domain organization of [POL_HV1N5] by SWISSPFAM
  • Other resources with information on 1AUM
  • Community annotation for 1AUM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science