1AUT	Hydrolase Hydrolase Inhibitor	date	Jun 08, 1996
title	Human Activated Protein C
authors	T.Mather, V.Oganessyan, P.Hof, W.Bode, R.Huber, S.Foundling, C.Esm
compound		source
Molecule: Activated Protein C Chain: C Synonym: Autoprothrombin Iia Ec: 3.4.21.69 Other_details: Gla-Domain Removed By Chymotrypsin		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Plasma Tissue: Plasma
Molecule: Activated Protein C Chain: L Synonym: Autoprothrombin Iia Ec: 3.4.21.69 Other_details: Gla-Domain Removed By Chymotrypsin		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Plasma Tissue: Plasma
symmetry	Space Group: P 21 21 21	R_factor 0.184 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.060 89.600 101.230 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	0G6, BHD, DPN, MAI	enzyme	Hydrolase E.C.3.4.21.69 BRENDA
Primary reference	The 2.8 A crystal structure of Gla-domainless activated protein C., Mather T, Oganessyan V, Hof P, Huber R, Foundling S, Esmon C, Bode W, EMBO J 1996 Dec 16;15(24):6822-31. PMID:9003757

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk] Biological Unit Coordinates (1aut.pdb1.gz) 72 Kb LPC: Ligand-Protein Contacts for 1AUT CSU: Contacts of Structural Units for 1AUT Likely Quarternary Molecular Structure file(s) for 1AUT Retrieve 1AUT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1AUT from S2C, [Save to disk]

View 1AUT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 1AUT

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1AUT, from MSDmotif at EBI Genome occurence of 1AUT's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1autc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1autl1, region L:49-96 [Jmol] [rasmolscript] [script source]     - Domain d1autl2, region L:97-146 [Jmol] [rasmolscript] [script source] Fold representative 1aut from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1aut_C] [1aut_L] [1aut_P] SWISS-PROT database: [P04070] Domain organization of [PROC_HUMAN] by SWISSPFAM Domains found in 1AUT: [EGF_CA] [EGF_like] [Tryp_SPc ] by SMART Alignments of the sequence of 1AUT with the sequences similar proteins can be viewed for 1AUT's classification [PROC_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [PROC_HUMAN] at ProtoMap. Click on the Cluster number.

Other resources with information on 1AUT

Community annotation for 1AUT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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