1AUT Hydrolase Hydrolase Inhibitor date Jun 08, 1996
title Human Activated Protein C
authors T.Mather, V.Oganessyan, P.Hof, W.Bode, R.Huber, S.Foundling, C.Esm
compound source
Molecule: Activated Protein C
Chain: C
Synonym: Autoprothrombin Iia
Ec: 3.4.21.69
Other_details: Gla-Domain Removed By Chymotrypsin
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Plasma
Tissue: Plasma

Molecule: Activated Protein C
Chain: L
Synonym: Autoprothrombin Iia
Ec: 3.4.21.69
Other_details: Gla-Domain Removed By Chymotrypsin

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Plasma
Tissue: Plasma
symmetry Space Group: P 21 21 21
R_factor 0.184 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.060 89.600 101.230 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand 0G6, BHD, DPN, MAI enzyme Hydrolase E.C.3.4.21.69 BRENDA
Primary referenceThe 2.8 A crystal structure of Gla-domainless activated protein C., Mather T, Oganessyan V, Hof P, Huber R, Foundling S, Esmon C, Bode W, EMBO J 1996 Dec 16;15(24):6822-31. PMID:9003757
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (1aut.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 1AUT
  • CSU: Contacts of Structural Units for 1AUT
  • Likely Quarternary Molecular Structure file(s) for 1AUT
  • Retrieve 1AUT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AUT from S2C, [Save to disk]
  • View 1AUT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AUT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1AUT, from MSDmotif at EBI
  • Genome occurence of 1AUT's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1autc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1autl1, region L:49-96 [Jmol] [rasmolscript] [script source]
        - Domain d1autl2, region L:97-146 [Jmol] [rasmolscript] [script source]
  • Fold representative 1aut from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1aut_C] [1aut] [1aut_L] [1aut_P]
  • SWISS-PROT database: [P04070]
  • Domain organization of [PROC_HUMAN] by SWISSPFAM
  • Domains found in 1AUT: [EGF] [EGF_CA] [Tryp_SPc ] by SMART
  • Other resources with information on 1AUT
  • Community annotation for 1AUT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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