1AXK Fusion Protein date Oct 16, 1997
title Engineered Bacillus Bifunctional Enzyme Gluxyn-1
authors J.Ay, U.Heinemann
compound source
Molecule: Gluxyn-1
Chain: A, B
Fragment: Fusion Of 1,3-1,4-Beta-Glucanase Domain And 1,4-B Xylanase Domain;
Ec: 3.2.1.73, 3.2.1.8
Engineered: Yes
Other_details: Active As Both A 1,3-1,4-Beta-Glucanase And Beta-Xylanase
Fragment: 1,4-Beta-Xylanase Domain
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Cell_line: Dh5-Alpha
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Dh5-Alpha
Expression_system_plasmid: Pfd1
symmetry Space Group: P 1 21 1
R_factor 0.176 R_Free 0.224
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.270 133.700 77.950 90.00 99.76 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand CA enzyme Hydrolase E.C.3.2.1.73 BRENDA
related structures by homologous chain: 1GLH, 1M4W
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and function of the Bacillus hybrid enzyme GluXyn-1: native-like jellyroll fold preserved after insertion of autonomous globular domain., Ay J, Gotz F, Borriss R, Heinemann U, Proc Natl Acad Sci U S A 1998 Jun 9;95(12):6613-8. PMID:9618460
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (1axk.pdb1.gz) 129 Kb
  • LPC: Ligand-Protein Contacts for 1AXK
  • CSU: Contacts of Structural Units for 1AXK
  • Likely Quarternary Molecular Structure file(s) for 1AXK
  • Structure Factors (362 Kb)
  • Retrieve 1AXK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AXK from S2C, [Save to disk]
  • Re-refined 1axk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1AXK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1AXK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AXK, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1axka1, region A:1-156,A:342-393 [Jmol] [rasmolscript] [script source]
        - Domain d1axka2, region A:157-341 [Jmol] [rasmolscript] [script source]
        - Domain d1axkb1, region B:1-156,B:342-394 [Jmol] [rasmolscript] [script source]
        - Domain d1axkb2, region B:157-341 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1axk_B] [1axk] [1axk_A]
  • SWISS-PROT database: [P23904] [P18429]
  • Domain organization of [GUB_PAEMA] [XYNA_BACSU] by SWISSPFAM
  • Other resources with information on 1AXK
  • Community annotation for 1AXK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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