1AZE Complex (Adaptor Protein Peptide) date Nov 17, 1997
title Nmr Structure Of The Complex Between The C32s-Y7v Mutant Of Domain Of Grb2 With A Peptide From Sos, 10 Structures
authors M.Vidal, E.Gincel, N.Goudreau, F.Cornille, F.Parker, M.Duchesne, B C.Garbay, B.P.Roques
compound source
Molecule: Grb2
Chain: A
Fragment: N-Terminal Sh3 Domain, Residues 1 - 55
Synonym: Ash, Growth Factor Receptor-Bound Protein 2
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Fruit
Gene: Grb2

Molecule: Sos
Chain: B
Fragment: Binding Site In H-Sos, Peptide Vpppvpprrr
Engineered: Yes
Organism_scientific: Drosophila Melanogaster
Organism_common: Fruit Fly
Organism_taxid: 7227
methodSolution NMR
related structures by homologous chain: 2GBQ, 3GBQ
Primary referenceMolecular and cellular analysis of Grb2 SH3 domain mutants: interaction with Sos and dynamin., Vidal M, Goudreau N, Cornille F, Cussac D, Gincel E, Garbay C, J Mol Biol 1999 Jul 16;290(3):717-30. PMID:10395825
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (182 Kb) [Save to disk]
  • Biological Unit Coordinates (1aze.pdb1.gz) 18 Kb
  • CSU: Contacts of Structural Units for 1AZE
  • Original NMR restraints for 1AZE from PDB
  • Retrieve 1AZE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1AZE from S2C, [Save to disk]
    • View 1AZE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1AZE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1AZE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1azea_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1aze_B] [1aze_A] [1aze]
  • SWISS-PROT database: [P62993] [P26675]
  • Domain organization of [GRB2_HUMAN] [SOS_DROME] by SWISSPFAM
  • Domain found in 1AZE: [SH3 ] by SMART
    • Other resources with information on 1AZE
  • Community annotation for 1AZE at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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