1B0J	Lyase	date	Nov 10, 1998
title	Crystal Structure Of Aconitase With Isocitrate
authors	S.J.Lloyd, H.Lauble, G.S.Prasad, C.D.Stout
compound		source
Molecule: Aconitate Hydratase Chain: A Synonym: Aconitase, Citrate Hydro-Lyase Ec: 4.2.1.3 Engineered: Yes Mutation: Yes		Organism_scientific: Sus Scrofa Organism_common: Pig Organism_taxid: 9823 Organ: Heart Organelle: Mitochondria Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 De3 Expression_system_plasmid: Puc118
symmetry	Space Group: B 1 1 2	R_factor 0.162 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 187.400 72.100 73.900 90.00 90.00 77.70
method	X-Ray Diffraction	resolution	2.50 Å
ligand	ICT, SF4	enzyme	Lyase E.C.4.2.1.3 BRENDA
note	1B0J supersedes 1AR3
related structures	by homologous chain: 1B0K, 5ACN
Gene Ontology	Chain Function Process Component A
Primary reference	The mechanism of aconitase: 1.8 A resolution crystal structure of the S642a:citrate complex., Lloyd SJ, Lauble H, Prasad GS, Stout CD, Protein Sci 1999 Dec;8(12):2655-62. PMID:10631981

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk] Biological Unit Coordinates (1b0j.pdb1.gz) 122 Kb LPC: Ligand-Protein Contacts for 1B0J CSU: Contacts of Structural Units for 1B0J Likely Quarternary Molecular Structure file(s) for 1B0J Retrieve 1B0J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1B0J from S2C, [Save to disk]

View 1B0J in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1B0J

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1B0J, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1b0ja2, region A:2-528 [Jmol] [rasmolscript] [script source]     - Domain d1b0ja1, region A:529-754 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1b0j_A] [1b0j] SWISS-PROT database: [P16276] Domain organization of [ACON_PIG] by SWISSPFAM

Other resources with information on 1B0J

Community annotation for 1B0J at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---