1B0O Lipocalin date Nov 11, 1998
title Bovine Beta-Lactoglobulin Complexed With Palmitate, Lattice
authors S.Y.Wu, L.Sawyer
compound source
Molecule: Beta-Lactoglobulin
Chain: A
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Variant: Genetic Variant B
Organ: Mammary Gland
Secretion: Milk
Cellular_location: Extracellular
Other_details: Protein Purchased From Sigma Chemicals, Lot
symmetry Space Group: P 32 2 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.480 53.480 111.640 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand PLM enzyme
related structures by homologous chain: 2BLG, 3BLG
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencebeta-lactoglobulin binds palmitate within its central cavity., Wu SY, Perez MD, Puyol P, Sawyer L, J Biol Chem 1999 Jan 1;274(1):170-4. PMID:9867826
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (1b0o.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1B0O
  • CSU: Contacts of Structural Units for 1B0O
  • Likely Quarternary Molecular Structure file(s) for 1B0O
  • Retrieve 1B0O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1B0O from S2C, [Save to disk]
  • View 1B0O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1B0O
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1B0O, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1b0o__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1b0o_A] [1b0o]
  • SWISS-PROT database: [P02754]
  • Domain organization of [LACB_BOVIN] by SWISSPFAM
  • Other resources with information on 1B0O
  • Community annotation for 1B0O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1B0O from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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