1B6E Nk Cell date Jan 14, 1999
title Human Cd94
authors J.C.Boyington, A.N.Riaz, A.Patamawenu, J.E.Coligan, A.G.Brooks, P.D.Sun
compound source
Molecule: Cd94
Chain: A
Fragment: C-Type Lectin Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell: Natural Killer Cell
Cellular_location: Cell Surface
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_cellular_location: Inclusion Bodies
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Modified Pet30
symmetry Space Group: P 65 2 2
R_factor 0.220 R_Free 0.322
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.710 91.710 84.230 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.60 Å
Primary referenceStructure of CD94 reveals a novel C-type lectin fold: implications for the NK cell-associated CD94/NKG2 receptors., Boyington JC, Riaz AN, Patamawenu A, Coligan JE, Brooks AG, Sun PD, Immunity 1999 Jan;10(1):75-82. PMID:10023772
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (1b6e.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 1B6E
  • Likely Quarternary Molecular Structure file(s) for 1B6E
  • Retrieve 1B6E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1B6E from S2C, [Save to disk]
  • View 1B6E in 3D
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  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1B6E, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1b6e__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1b6e from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1b6e_A] [1b6e]
  • SWISS-PROT database: [Q13241]
  • Domain organization of [KLRD1_HUMAN] by SWISSPFAM
  • Domain found in 1B6E: [CLECT ] by SMART
  • Other resources with information on 1B6E
  • Community annotation for 1B6E at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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