1B9S NOVEL AROMATIC INHIBITORS OF INFLUENZA VIRUS NEURAMINIDASE MAKE SELECTIVE INTERACTIONS WITH CONSERVED RESIDUES AND WATER MOLECULES IN THE ACTIVE SITE date
authors Air GM, Atigadda VR, Brouillette WJ, Duarte F, Finley JB, Luo M, Zhao JJ
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, FDI, NAG BindingDB enzyme
related structures by homologous chain: 1VCJ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNovel aromatic inhibitors of influenza virus neuraminidase make selective interactions with conserved residues and water molecules in the active site., Finley JB, Atigadda VR, Duarte F, Zhao JJ, Brouillette WJ, Air GM, Luo M, J Mol Biol 1999 Nov 12;293(5):1107-19. PMID:10547289
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (1b9s.pdb1.gz) 251 Kb
  • LPC: Ligand-Protein Contacts for 1B9S
  • CSU: Contacts of Structural Units for 1B9S
  • Likely Quarternary Molecular Structure file(s) for 1B9S
  • Structure Factors (106 Kb)
  • Retrieve 1B9S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1B9S from S2C, [Save to disk]
  • Re-refined 1b9s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1B9S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1B9S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1B9S, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1b9sa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1b9s_A] [1b9s]
  • SWISS-PROT database: [P03474]
  • Domain organization of [NRAM_INBLE] by SWISSPFAM
  • Other resources with information on 1B9S
  • Community annotation for 1B9S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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