1BCV SYNTHETIC PEPTIDE CORRESPONDING TO THE MAJOR IMMUNOGEN SITE OF FMD VIRUS, NMR, 10 STRUCTURES date
authors Petit, M.C., Benkirane, N., Guichard, G., Du, A.Phan.Chan., Cung, M.T., Briand, J.P., Muller, S.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 10 Modelsresolution
ligand ACE enzyme
Primary referenceSolution structure of a retro-inverso peptide analogue mimicking the foot-and-mouth disease virus major antigenic site. Structural basis for its antigenic cross-reactivity with the parent peptide., Petit MC, Benkirane N, Guichard G, Du AP, Marraud M, Cung MT, Briand JP, Muller S, J Biol Chem 1999 Feb 5;274(6):3686-92. PMID:9920919
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (1bcv.pdb1.gz) 5 Kb
  • LPC: Ligand-Protein Contacts for 1BCV
  • CSU: Contacts of Structural Units for 1BCV
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1BCV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BCV from S2C, [Save to disk]
  • View 1BCV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BCV
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1BCV, from MSDmotif at EBI
  • Fold representative 1bcv from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bcv_A] [1bcv]
  • SWISS-PROT database: [P03308]
  • Belongs to the poliovirus 2b viroporin (2b viroporin) family according to TCDB.
  • Domain organization of [POLG_FMDVA] by SWISSPFAM
  • Other resources with information on 1BCV
  • Community annotation for 1BCV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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