1BDM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAX enzyme
related structures by homologous chain: 1BMD
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDeterminants of protein thermostability observed in the 1.9-A crystal structure of malate dehydrogenase from the thermophilic bacterium Thermus flavus., Kelly CA, Nishiyama M, Ohnishi Y, Beppu T, Birktoft JJ, Biochemistry. 1993 Apr 20;32(15):3913-22. PMID:8471603
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (1bdm.pdb1.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 1BDM
  • CSU: Contacts of Structural Units for 1BDM
  • Likely Quarternary Molecular Structure file(s) for 1BDM
  • Retrieve 1BDM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BDM from S2C, [Save to disk]
  • View 1BDM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bdm_B] [1bdm] [1bdm_A]
  • SWISS-PROT database: [P10584]

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