1BG2 Motor Protein date Jun 04, 1998
title Human Ubiquitous Kinesin Motor Domain
authors F.J.Kull, E.P.Sablin, R.Lau, R.J.Fletterick, R.D.Vale
compound source
Molecule: Kinesin
Chain: A
Fragment: Motor Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Bl21
Organ: Ubiquitous
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_plasmid: Pet
symmetry Space Group: P 21 21 21
R_factor 0.216 R_Free 0.288
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.540 67.940 112.950 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ACT, ADP, MG enzyme
note 1BG2 (Molecule of the Month:pdb64)
related structures by homologous chain: 2KIN
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the kinesin motor domain reveals a structural similarity to myosin., Kull FJ, Sablin EP, Lau R, Fletterick RJ, Vale RD, Nature 1996 Apr 11;380(6574):550-5. PMID:8606779
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (1bg2.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 1BG2
  • CSU: Contacts of Structural Units for 1BG2
  • Likely Quarternary Molecular Structure file(s) for 1BG2
  • Retrieve 1BG2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BG2 from S2C, [Save to disk]
  • View 1BG2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BG2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BG2, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bg2__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bg2] [1bg2_A]
  • SWISS-PROT database: [P33176]
  • Domain organization of [KINH_HUMAN] by SWISSPFAM
  • Domain found in 1BG2: [KISc ] by SMART
  • Other resources with information on 1BG2
  • Community annotation for 1BG2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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