1BG6 Oxidoreductase date Jun 05, 1998
title Crystal Structure Of The N-(1-D-Carboxylethyl)-L-Norvaline Dehydrogenase From Arthrobacter Sp. Strain 1c
authors K.L.Britton, Y.Asano, D.W.Rice
compound source
Molecule: N-(1-D-Carboxylethyl)-L-Norvaline Dehydrogenase
Chain: A
Engineered: Yes
Organism_scientific: Arthrobacter Sp.
Organism_taxid: 79670
Strain: 1c
Gene: Odh
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Podh1
symmetry Space Group: P 21 21 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
104.900 80.000 45.500 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure and active site location of N-(1-D-carboxylethyl)-L-norvaline dehydrogenase., Britton KL, Asano Y, Rice DW, Nat Struct Biol 1998 Jul;5(7):593-601. PMID:9665174
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (1bg6.pdb1.gz) 106 Kb
  • CSU: Contacts of Structural Units for 1BG6
  • Likely Quarternary Molecular Structure file(s) for 1BG6
  • Retrieve 1BG6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BG6 from S2C, [Save to disk]
  • View 1BG6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BG6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BG6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bg6_1, region 188-359 [Jmol] [rasmolscript] [script source]
        - Domain d1bg6_2, region 4-187 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bg6_A] [1bg6]
  • SWISS-PROT database: [Q44297]
  • Domain organization of [ODH_ARTSC] by SWISSPFAM
  • Other resources with information on 1BG6
  • Community annotation for 1BG6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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