1BIM Hydrolase Hydrolase Inhibitor date Sep 27, 1995
title Crystallographic Studies On The Binding Modes Of P2-P3 Butan Renin Inhibitors
authors L.Tong
compound source
Molecule: Renin
Chain: A, B
Synonym: Angiotensinogenase
Ec: 3.4.23.15
Engineered: Yes
Other_details: Glycosylated
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cmv Ie-Human Preprorenin Cdna, Ren
Expression_system: Canis Lupus Familiaris
Expression_system_common: Dog
Expression_system_taxid: 9615
Expression_system_strain: Familiaris
Expression_system_plasmid: Pmnc Retroviral Vector
Expression_system_gene: Cmv Ie-Human Preprorenin Cdna
Other_details: Stably Transferred
symmetry Space Group: P 21 3
R_factor 0.178 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
142.900 142.900 142.900 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand 0QB enzyme Hydrolase E.C.3.4.23.15 BRENDA
related structures by homologous chain: 1BBS, 2REN
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystallographic studies on the binding modes of P2-P3 butanediamide renin inhibitors., Tong L, Pav S, Lamarre D, Simoneau B, Lavallee P, Jung G, J Biol Chem 1995 Dec 8;270(49):29520-4. PMID:7493993
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (1bim.pdb1.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 1BIM
  • CSU: Contacts of Structural Units for 1BIM
  • Likely Quarternary Molecular Structure file(s) for 1BIM
  • Retrieve 1BIM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BIM from S2C, [Save to disk]
  • View 1BIM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BIM
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1BIM, from MSDmotif at EBI
  • Genome occurence of 1BIM's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bima_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bimb_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1bim from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bim] [1bim_A] [1bim_B]
  • SWISS-PROT database: [P00797]
  • Domain organization of [RENI_HUMAN] by SWISSPFAM
  • Other resources with information on 1BIM
  • Community annotation for 1BIM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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