1BNV Lyase date Jul 30, 1998
title Carbonic Anhydrase II Inhibitor
authors P.A.Boriack-Sjodin, S.Zeitlin, D.W.Christianson
compound source
Molecule: Carbonic Anhydrase
Chain: A
Ec: 4.2.1.1
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell: Erythrocytes
Cellular_location: Cytoplasm
symmetry Space Group: P 1 21 1
R_factor 0.139 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.700 41.700 73.000 90.00 104.60 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand AL7, HG, ZN BindingDB enzyme Lyase E.C.4.2.1.1 BRENDA
related structures by homologous chain: 1BNQ, 1CNB
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural analysis of inhibitor binding to human carbonic anhydrase II., Boriack-Sjodin PA, Zeitlin S, Chen HH, Crenshaw L, Gross S, Dantanarayana A, Delgado P, May JA, Dean T, Christianson DW, Protein Sci 1998 Dec;7(12):2483-9. PMID:9865942
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (1bnv.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 1BNV
  • CSU: Contacts of Structural Units for 1BNV
  • Likely Quarternary Molecular Structure file(s) for 1BNV
  • Retrieve 1BNV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BNV from S2C, [Save to disk]
  • View 1BNV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BNV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BNV, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bnv__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bnv_A] [1bnv]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 1BNV: [Carb_anhydrase ] by SMART
  • Other resources with information on 1BNV
  • Community annotation for 1BNV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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