1BOH	Transferase	date	Aug 04, 1998
title	Sulfur-Substituted Rhodanese (Orthorhombic Form)
authors	F.Gliubich, R.Berni, M.Cianci, R.J.Trevino, P.M.Horowitz, G.Zanot
compound		source
Molecule: Rhodanese Chain: A Ec: 2.8.1.1 Engineered: Yes Other_details: Sulfur Substituted At Residue Cys 247		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913 Organ: Liver Cellular_location: Cytoplasm Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21
symmetry	Space Group: P 21 21 2	R_factor 0.166 R_Free 0.215
crystal cell	length a length b length c angle alpha angle beta angle gamma 89.740 72.350 39.070 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	CSS	enzyme	Transferase E.C.2.8.1.1 BRENDA
related structures	by homologous chain: 1BOI, 1RHD
Gene Ontology	Chain Function Process Component A
Primary reference	NH2-terminal sequence truncation decreases the stability of bovine rhodanese, minimally perturbs its crystal structure, and enhances interaction with GroEL under native conditions., Trevino RJ, Gliubich F, Berni R, Cianci M, Chirgwin JM, Zanotti G, Horowitz PM, J Biol Chem. 1999 May 14;274(20):13938-47. PMID:10318804

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (1boh.pdb1.gz) 48 Kb LPC: Ligand-Protein Contacts for 1BOH CSU: Contacts of Structural Units for 1BOH Likely Quarternary Molecular Structure file(s) for 1BOH Structure Factors (165 Kb) Retrieve 1BOH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1BOH from S2C, [Save to disk] Re-refined 1boh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1BOH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1BOH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1BOH, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1boh_1, region 1-149 [Jmol] [rasmolscript] [script source]     - Domain d1boh_2, region 150-293 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1boh] [1boh_A] SWISS-PROT database: [P00586] Domain organization of [THTR_BOVIN] by SWISSPFAM Domain found in 1BOH: [RHOD ] by SMART

Other resources with information on 1BOH

Community annotation for 1BOH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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