1BR9 Proteinase Inhibitor date Aug 28, 1998
title Human Tissue Inhibitor Of Metalloproteinase-2
authors A.Tuuttila, E.Morgunova, U.Bergmann, Y.Lindqvist, K.Tryggvason, G.Schneider
compound source
Molecule: Metalloproteinase-2 Inhibitor
Chain: A
Synonym: Timp-2, Tissue Inhibitor Of Metalloproteinase-2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
Expression_system_cell_line: H5
Expression_system_vector: Baculovirus
symmetry Space Group: P 21 21 2
R_factor 0.238 R_Free 0.271
length a length b length c angle alpha angle beta angle gamma
72.050 52.700 46.100 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
related structures by homologous chain: 1BQQ

Primary referenceThree-dimensional structure of human tissue inhibitor of metalloproteinases-2 at 2.1 A resolution., Tuuttila A, Morgunova E, Bergmann U, Lindqvist Y, Maskos K, Fernandez-Catalan C, Bode W, Tryggvason K, Schneider G, J Mol Biol 1998 Dec 11;284(4):1133-40. PMID:9837731
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (1br9.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 1BR9
  • Likely Quarternary Molecular Structure file(s) for 1BR9
  • Structure Factors (77 Kb)
  • Retrieve 1BR9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BR9 from S2C, [Save to disk]
  • Re-refined 1br9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1BR9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BR9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1BR9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1br9__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1br9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1br9_A] [1br9]
  • SWISS-PROT database: [P16035]
  • Domain organization of [TIMP2_HUMAN] by SWISSPFAM
  • Domains found in 1BR9: [C345C] [NTR ] by SMART
  • Other resources with information on 1BR9
  • Community annotation for 1BR9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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