1BTV Major Birch Pollen Allergen date Jan 30, 1997
title Structure Of Bet V 1, Nmr, 20 Structures
authors P.Osmark, F.M.Poulsen, M.Gajhede, J.N.Larsen, M.D.Spangfort
compound source
Molecule: Bet V 1
Chain: A
Engineered: Yes
 Organism_scientific: Betula Pendula
Organism_common: European White Birch
Organism_taxid: 3505
Cell: Pollen Grain
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pmal
methodSolution NMR
related structures by homologous chain: 1B6F, 1FSK
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein phosphatase inhibito...


    • Primary referenceX-ray and NMR structure of Bet v 1, the origin of birch pollen allergy., Gajhede M, Osmark P, Poulsen FM, Ipsen H, Larsen JN, Joost van Neerven RJ, Schou C, Lowenstein H, Spangfort MD, Nat Struct Biol 1996 Dec;3(12):1040-5. PMID:8946858
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (816 Kb) [Save to disk]
  • Biological Unit Coordinates (1btv.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 1BTV
  • Retrieve 1BTV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BTV from S2C, [Save to disk]
    • View 1BTV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BTV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BTV, from MSDmotif at EBI
  • Genome occurence of 1BTV's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1btv__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1btv_A] [1btv]
  • SWISS-PROT database: [P15494]
  • Domain organization of [BEV1A_BETVE] by SWISSPFAM
    • Other resources with information on 1BTV
  • Community annotation for 1BTV at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1BTV from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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