1BWW Immune System date Sep 29, 1998
title Bence-Jones Immunoglobulin Rei Variable Portion, T39k Mutant
authors I.Uson, E.Pohl, T.R.Schneider, Z.Dauter, A.Schmidt, H.J.Fritz, G.M.Sheldrick
compound source
Molecule: Protein (Ig Kappa Chain V-I Region Rei)
Chain: A, B
Fragment: Immunoglobulin Kappa Light Chain
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cellular_location: Periplasm
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.400 40.100 43.100 66.90 85.40 73.80
method X-Ray Diffractionresolution 1.70 Å
related structures by homologous chain: 1C5C
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary reference1.7 A structure of the stabilized REIv mutant T39K. Application of local NCS restraints., Uson I, Pohl E, Schneider TR, Dauter Z, Schmidt A, Fritz HJ, Sheldrick GM, Acta Crystallogr D Biol Crystallogr 1999 Jun;55 ( Pt 6):1158-67. PMID:10329778
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (1bww.pdb1.gz) 36 Kb
  • CSU: Contacts of Structural Units for 1BWW
  • Likely Quarternary Molecular Structure file(s) for 1BWW
  • Structure Factors (353 Kb)
  • Retrieve 1BWW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BWW from S2C, [Save to disk]
  • Re-refined 1bww structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1BWW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BWW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BWW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bwwa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1bwwb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bww_A] [1bww] [1bww_B]
  • SWISS-PROT database: [P01607]
  • Domain organization of [KV115_HUMAN] by SWISSPFAM
  • Domain found in 1BWW: [IGv ] by SMART
    • Other resources with information on 1BWW
  • Community annotation for 1BWW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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