1C9Q AVERAGE NMR SOLUTION STRUCTURE OF THE BIR-2 DOMAIN OF XIAP date
authors Meadows, R.P., Fesik, S.W.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
related structures by homologous chain: 1I3O
Primary referenceNMR structure and mutagenesis of the inhibitor-of-apoptosis protein XIAP., Sun C, Cai M, Gunasekera AH, Meadows RP, Wang H, Chen J, Zhang H, Wu W, Xu N, Ng SC, Fesik SW, Nature 1999 Oct 21;401(6755):818-22. PMID:10548111
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1c9q.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1C9Q
  • CSU: Contacts of Structural Units for 1C9Q
  • Retrieve 1C9Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1C9Q from S2C, [Save to disk]
    • View 1C9Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1C9Q
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1C9Q, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1c9qa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1c9q] [1c9q_A]
  • SWISS-PROT database: [P98170]
  • Domain organization of [XIAP_HUMAN] by SWISSPFAM
  • Domain found in 1C9Q: [BIR ] by SMART
    • Other resources with information on 1C9Q
  • Community annotation for 1C9Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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