1CFT	Polyspecificity	date	Mar 19, 1999
title	Anti-P24 (Hiv-1) Fab Fragment Cb41 Complexed With An Epitope D-Peptide
authors	T.Keitel, A.Kramer, H.Wessner, C.Scholz, J.Schneider-Mergener, W.
compound		source
Molecule: Protein (Igg2a Kappa Antibody Cb41 (Light Chain)) Chain: A Fragment: Fab		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: Balbc
Molecule: Protein (Igg2a Kappa Antibody Cb41 (Heavy Chain)) Chain: B Fragment: Fab		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: Balbc
Molecule: Protein (Antigen Bound Peptide) Chain: C Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 61 2 2	R_factor 0.237 R_Free 0.328
crystal cell	length a length b length c angle alpha angle beta angle gamma 106.060 106.060 294.130 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.80 Å
related structures	by homologous chain: 1KFA, 1R3K
Gene Ontology	Chain Function Process Component A
Primary reference	Crystallographic analysis of anti-p24 (HIV-1) monoclonal antibody cross-reactivity and polyspecificity., Keitel T, Kramer A, Wessner H, Scholz C, Schneider-Mergener J, Hohne W, Cell 1997 Dec 12;91(6):811-20. PMID:9413990

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk] Biological Unit Coordinates (1cft.pdb1.gz) 67 Kb CSU: Contacts of Structural Units for 1CFT Likely Quarternary Molecular Structure file(s) for 1CFT Retrieve 1CFT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1CFT from S2C, [Save to disk]

View 1CFT in 3D

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Visual 3D analysis of 1CFT

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1CFT, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1cfta1, region A:1-107 [Jmol] [rasmolscript] [script source]     - Domain d1cfta2, region A:108-214 [Jmol] [rasmolscript] [script source]     - Domain d1cftb1, region B:1-112 [Jmol] [rasmolscript] [script source]     - Domain d1cftb2, region B:113-213 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1cft] [1cft_A] [1cft_C] [1cft_B] SWISS-PROT database: [P01864] Domain organization of [GCAB_MOUSE] by SWISSPFAM Domains found in 1CFT: [IG_like] [IGv ] by SMART

Other resources with information on 1CFT

Community annotation for 1CFT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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