1CIM Lyase(Oxo-Acid) date Oct 20, 1993
title The Positions Of His-64 And A Bound Water In Human Carbonic II Upon Binding Three Structurally Related Inhibitors
authors G.M.Smith, R.S.Alexander, D.W.Christianson, B.M.Mckeever, G.S.Po J.P.Springer, W.C.Randall, J.J.Baldwin, C.N.Habecker
compound source
Molecule: Carbonic Anhydrase II
Chain: A
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.720 41.930 72.690 90.00 104.77 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand MMC, PTS, ZN BindingDB enzyme Lyase E.C.4.2.1.1 BRENDA
related structures by homologous chain: 1CIN, 1IF6
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePositions of His-64 and a bound water in human carbonic anhydrase II upon binding three structurally related inhibitors., Smith GM, Alexander RS, Christianson DW, McKeever BM, Ponticello GS, Springer JP, Randall WC, Baldwin JJ, Habecker CN, Protein Sci 1994 Jan;3(1):118-25. PMID:8142888
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (1cim.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 1CIM
  • CSU: Contacts of Structural Units for 1CIM
  • Likely Quarternary Molecular Structure file(s) for 1CIM
  • Retrieve 1CIM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CIM from S2C, [Save to disk]
  • View 1CIM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CIM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CIM, from MSDmotif at EBI
  • Genome occurence of 1CIM's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cim__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cim_A] [1cim]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 1CIM: [Carb_anhydrase ] by SMART
  • Other resources with information on 1CIM
  • Community annotation for 1CIM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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