1CM8 Transferase date May 17, 1999
title Phosphorylated Map Kinase P38-Gamma
authors S.Bellon, M.J.Fitzgibbon, T.Fox, H.M.Hsiao, K.P.Wilson
compound source
Molecule: Phosphorylated Map Kinase P38-Gamma
Chain: A, B
Synonym: Stress-Activated Protein Kinase-3, Erk6, Erk5
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.232 R_Free 0.283
length a length b length c angle alpha angle beta angle gamma
63.500 66.820 206.020 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand ANP, MG, PTR, TPO enzyme
A, B

Primary referenceThe structure of phosphorylated p38gamma is monomeric and reveals a conserved activation-loop conformation., Bellon S, Fitzgibbon MJ, Fox T, Hsiao HM, Wilson KP, Structure Fold Des 1999 Sep 15;7(9):1057-65. PMID:10508788
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (1cm8.pdb1.gz) 57 Kb
  • Biological Unit Coordinates (1cm8.pdb2.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1CM8
  • CSU: Contacts of Structural Units for 1CM8
  • Likely Quarternary Molecular Structure file(s) for 1CM8
  • Retrieve 1CM8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CM8 from S2C, [Save to disk]
  • View 1CM8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CM8
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1CM8, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cm8a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1cm8b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1cm8 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cm8_A] [1cm8_B] [1cm8]
  • SWISS-PROT database: [P53778]
  • Domain organization of [MK12_HUMAN] by SWISSPFAM
  • Domain found in 1CM8: [S_TKc ] by SMART
  • Other resources with information on 1CM8
  • Community annotation for 1CM8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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