1CQ0 De Novo Protein date Aug 04, 1999
title Solution Structure Of A Human Hypocretin-2orexin-B'Solution Of A Human Hypocretin-2orexin-B '
authors K.H.Lee, E.J.Bang, K.J.Chae, D.W.Lee, W.Lee
compound source
Molecule: Protein (New Hypothalamic Neuropeptideorexin-B28
Chain: A
Fragment: Human Hypocretin-2
Other_details: Synthetic Peptide
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Synthetic
methodSolution NMR
note 1CQ0 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of a new hypothalamic neuropeptide, human hypocretin-2/orexin-B., Lee JH, Bang E, Chae KJ, Kim JY, Lee DW, Lee W, Eur J Biochem 1999 Dec;266(3):831-9. PMID:10583376
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (10 Kb) [Save to disk]
  • Biological Unit Coordinates (1cq0.pdb1.gz) 8 Kb
  • CSU: Contacts of Structural Units for 1CQ0
  • Original NMR restraints for 1CQ0 from PDB
  • Retrieve 1CQ0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CQ0 from S2C, [Save to disk]
  • View 1CQ0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CQ0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1CQ0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cq0a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1cq0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cq0_A] [1cq0]
  • SWISS-PROT database: [O43612]
  • Domain organization of [OREX_HUMAN] by SWISSPFAM
  • Other resources with information on 1CQ0
  • Community annotation for 1CQ0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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