1CSG Cytokine date Nov 23, 1992
title Three-Dimensional Structure Of Recombinant Human Granulocyte Macrophage Colony-Stimulating Factor
authors M.R.Walter, W.J.Cook, S.E.Ealick
compound source
Molecule: Granulocyte-Macrophage Colony-Stimulating Factor
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.254 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.600 58.800 126.900 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
related structures by homologous chain: 2GMF
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThree-dimensional structure of recombinant human granulocyte-macrophage colony-stimulating factor., Walter MR, Cook WJ, Ealick SE, Nagabhushan TL, Trotta PP, Bugg CE, J Mol Biol 1992 Apr 20;224(4):1075-85. PMID:1569568
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1csg.pdb1.gz) 34 Kb
  • CSU: Contacts of Structural Units for 1CSG
  • Likely Quarternary Molecular Structure file(s) for 1CSG
  • Retrieve 1CSG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CSG from S2C, [Save to disk]
  • View 1CSG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CSG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CSG, from MSDmotif at EBI
  • Genome occurence of 1CSG's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1csga_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1csgb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1csg_B] [1csg] [1csg_A]
  • SWISS-PROT database: [P04141]
  • Domain organization of [CSF2_HUMAN] by SWISSPFAM
  • Domain found in 1CSG: [CSF2 ] by SMART
  • Other resources with information on 1CSG
  • Community annotation for 1CSG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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