1CTF Ribosomal Protein date Sep 02, 1986
title Structure Of The C-Terminal Domain Of The Ribosomal Protein From Escherichia Coli At 1.7 Angstroms
authors M.Leijonmarck, A.Liljas
compound source
Molecule: Ribosomal Protein L7l12
Chain: A
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.174 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.830 54.830 42.670 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand SO4 enzyme
related structures by homologous chain: 1RQV
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the C-terminal domain of the ribosomal protein L7/L12 from Escherichia coli at 1.7 A., Leijonmarck M, Liljas A, J Mol Biol 1987 Jun 5;195(3):555-79. PMID:3309338
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (1ctf.pdb1.gz) 22 Kb
  • LPC: Ligand-Protein Contacts for 1CTF
  • CSU: Contacts of Structural Units for 1CTF
  • Likely Quarternary Molecular Structure file(s) for 1CTF
  • Structure Factors (81 Kb)
  • Retrieve 1CTF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CTF from S2C, [Save to disk]
  • Re-refined 1ctf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1CTF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1CTF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CTF, from MSDmotif at EBI
  • Genome occurence of 1CTF's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ctf__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ctf_A] [1ctf]
  • SWISS-PROT database: [P0A7K2]
  • Domain organization of [RL7_ECOLI] by SWISSPFAM
    • Other resources with information on 1CTF
  • Community annotation for 1CTF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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